PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10004876
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 534aa    MW: 58965.9 Da    PI: 7.3852
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10004876genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.9e-10229259434
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                   k  rr+++NReAAr+sR+RKka++++Le  
  Lus10004876 229 AKTLRRLAQNREAARKSRLRKKAYVQQLESS 259
                  6889************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-7225273No hitNo description
SMARTSM003383.7E-7226303IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278228272IPR004827Basic-leucine zipper domain
PfamPF001704.8E-7229263IPR004827Basic-leucine zipper domain
CDDcd147081.45E-24230282No hitNo description
SuperFamilySSF579592.19E-6230272No hitNo description
PROSITE patternPS000360233248IPR004827Basic-leucine zipper domain
PfamPF141441.4E-31311386IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MGSSHRMGET GLSDSGPSTT HHHLPYALLH GMNPPSNSTA FMHQDGPAFD FGELEEAIVL  60
QGVKIRNEPA RSQVEVGSSS SGLFGEGVGR PAATTLEMFP SWPMRFHPHQ QHQQQHQHQQ  120
HTPIGSSRSG GESTDSGSGV NTTISEAHHN QHQHLHQPES PMSTKKAASS SSDHFHHFQQ  180
MDMVAAASNG VGVGPSSSSQ QQNQNQSSDH KPSTTDKRKG TSSEKPLDAK TLRRLAQNRE  240
AARKSRLRKK AYVQQLESSR IKLAQMEQEL QRARQQGLFM GGCGGAGANL SSAAAMFDME  300
YARWLEDDLR HMSELRTGLN AHLSDGDLRV VVDRYISHYD EIFRLKGLTA KSDVFHLITG  360
MWTTPAERCF LWMGGFRPSE LIKMLISQLD PLTEQQVMGI YSLQHSSQQA EDAMSQGLEQ  420
LQQSLVDTIA GGPVVDGMQQ MAVALGKLAN LEGFVRQADN LRQQTLHQLR RILTVRQAAR  480
CFLVIGEYYG RLRALSSLWA SRPRDAMLGD ENSCQTTTDL QMVQSSHSHF ANF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077858.10.0PREDICTED: transcription factor TGA2 isoform X2
SwissprotO241601e-133TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A067KMV40.0A0A067KMV4_JATCU; Uncharacterized protein
STRINGPOPTR_0009s16590.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45553357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein